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Clinisys Laboratory Solution (CLS) LIMS overview

By Thibaut Desseignes, founder and editor · Last verified · 18 independent and 43 vendor sources

Verdict. Clinisys Laboratory Solution (CLS) is a cloud LIMS sold in packages for environmental and water, public health, toxicology, food, crop science and contract testing labs, with clinical pathology and genomics LIS packages on the same platform in North America. It is a good fit for public health and environmental laboratories, the segment where US public laboratories run Clinisys LIMS products. It is less suited to pharmaceutical QC, an offering Clinisys announces as coming soon.

Clinisys LIMS key facts

ReplacesClinisys says the capabilities of HORIZON LIMS are now part of CLS and that Element LIMS capabilities enhance it; Clinisys still handles Element LIMS sales and upgrades.
PriceQuote only. Public contracts for Element LIMS (Fresno), HORIZON LIMS (New Hampshire) and a Clinisys LIMS the contract does not name (Michigan) give price benchmarks; see the pricing section.
HostingRun by Clinisys on Microsoft Azure, according to a 2024 Clinisys interview. No on-premise option is described for CLS.
Implementation timeNot published. Alaska moved its existing Clinisys system to the cloud in 75 days instead of the planned 180, keeping its integration engine on site.
CompliancePart 11, ISO 17025, CLIA, ISO 15189 and HIPAA are listed on package pages, without a described e-signature workflow; nothing is published on GAMP 5 or EU Annex 11.
Who uses itState public health laboratories in Michigan, Alaska, New Jersey and New Hampshire; EPA Region 4's laboratory documents its use of Element LIMS in 2026, and Fresno's wastewater laboratory contracted it in 2023.

Clinisys LIMS assessment

Editorial reading of documented evidence, not a hands-on test. See how we assess.

Not assessed yet, for lack of independent material: Usability.

A good fit for

  • US state and local public health laboratories that run clinical and environmental testing on one system
  • Environmental, water and wastewater laboratories, including HORIZON and Element LIMS customers planning their next step
  • Multi-discipline testing networks (food, crop science, toxicology, contract testing) that want a single SaaS platform

Less suited to

  • Pharmaceutical QC laboratories that need documented e-signatures, GAMP 5 and EU Annex 11 support
  • Clinical laboratories outside North America looking for the LIS packages
  • Buyers who need a published price to build a shortlist

Strengths

  • Public records show adoption by state public health laboratories (Michigan, Alaska, New Jersey, New Hampshire)
  • Ranked first in Alaska's 2023 cloud LIMS tender for its public health laboratories, with 841 points against 512
  • One SaaS platform covers environmental, water, food, toxicology, crop science and contract testing, with clinical LIS packages in North America
  • Company-level ISO 27001, 27017 and 27018 certificates listed with validity dates up to April 2027

Limitations

  • No public pricing and no published implementation time
  • No described e-signature workflow, and nothing published on GAMP 5 or EU Annex 11
  • Pharma and biotech offerings are announced as coming soon

Clinisys LIMS pricing

No public price list: quote only. Clinisys sells CLS as a cloud subscription. The public contracts and council records listed below give price benchmarks; none of them names CLS.

Prices in public records

Clinisys LIMS publishes no price list. Public documents give price benchmarks; amounts are not reproduced here, and the documents can be read at their source:

Clinisys LIMS compliance and security

Vendor-documented: a dedicated vendor page or documentation article describes it. Vendor-stated: the vendor states it without describing it in detail. Not mentioned: found neither in the vendor's material nor in independent sources.

StandardEvidenceWhat we found
21 CFR Part 11 Vendor-stated Listed on the Food & Beverage package page, which mentions audit trails; no electronic signature workflow is described. [23]
ISO/IEC 17025 Vendor-stated Named on the Crop Sciences and Food & Beverage package pages. [25]
CLIA Vendor-stated Named on the Toxicology page, alongside a described audit trail and chain of custody across the specimen lifecycle. [22]
ISO 15189 Vendor-stated Named on the Clinical Pathology page, which also describes document control, SOPs, non-conformances and staff competency records. [26]
HIPAA Vendor-stated Named in regulation lists on the Public Health and Clinical Pathology pages. [21]
GDPR Vendor-stated Stated for Clinisys infrastructure in general, not for CLS specifically. [30]
EU GMP Annex 11 Not mentioned
GAMP 5 Not mentioned
Security and hosting details (6)

What Clinisys Laboratory Solution is

Clinisys Laboratory Solution (CLS) is the cloud LIMS that Clinisys, a Roper Technologies business, sells to non-clinical and public health laboratories. It is the result of a string of acquisitions. Roper bought Horizon Lab Systems (HORIZON LIMS) and Common Cents Systems (ApolloLIMS) in 2022, merged them with CliniSys and Sunquest under the Clinisys name, then bought Promium (Element LIMS, environmental and water markets) in May 2023 for 16.5 million USD. Clinisys launched CLS in July 2023 and says the capabilities of HORIZON and Element are now part of it.

How CLS is packaged

CLS is one SaaS platform sold as discipline packages, each pre-configured for a laboratory type:

PackageForWhat Clinisys describes
Environmental and Water QualityEnvironmental, drinking water and wastewater labsSample login, collection scheduling, mobile collection in the field, Level 4 client reports; positioned for NELAC/ELAP, Safe Drinking Water Act and UCMR requirements
Public HealthState and local public health labsSurveillance and outbreak response, NEDSS and LRN interfaces
ToxicologyForensic and drug testing labsChain of custody from collection to reporting
Food & BeverageFood testing labsRetained sample tracking from receipt to disposal, multi-level matrix management (2025)
Crop SciencesAgricultural testing labsOn-site and remote sample collection
Contract ServicesContract testing labsClient portal (launched April 2024)
Clinical Pathology and GenomicsNorth American clinical labsLIS packages on the same platform since version 2025.2

A pre-configured content package for environmental and water labs was released in January 2025. Clinisys presents these packages as the way to keep a configuration compatible with future updates, and says customization added to a package lengthens installation.

What changed in 2025 and 2026

Version 2025.2 (November 2025) added the clinical packages, the CLS CARE assistant, which answers questions from CLS documentation and has no access to patient data, updated QC rules and Dutch language support. Version 2025.3 (July 2026) brought the Gateway Module, presented as the evolution of the LabOnline client portal, support for the Clinisys Collect mobile app, a connection to the SciNote ELN and a revised approach to test configuration. A partnership with the low-code vendor Decisions, announced the same month, is bringing a workflow engine into the platform, and document intelligence features were announced on 7 October 2026. Most of these items come from release announcements, so the capability tables list them as vendor-stated.

Reading the public record

The independent evidence comes from public buyers rather than reviewers, and it points to one segment: state and municipal laboratories that combine clinical and environmental work. Alaska’s health department ranked Clinisys first in its 2023 tender for a cloud LIMS, with 841 points against 512 for the runner-up. New Jersey’s environmental and chemical laboratory chose Clinisys over STARLIMS to replace the Element LIMS it had run since 2009, rating it higher on ease of migration, support services and state procurement.

These documents refer to Clinisys, or to HORIZON and Element before their integration, rather than to Clinisys Laboratory Solution by name. The Alaska case also records the trade-offs of a deadline-driven cloud move: to go live in 75 days, the laboratory kept its integration engine on site, so reporting data now travels to the cloud and back, and it dropped the parallel run it had planned.

What users report

G2’s page for Clinisys covers the vendor’s products as a whole, not necessarily Clinisys Laboratory Solution: of the 9 of its 22 reviews we read, four name Sunquest or MYSIS, none names CLS, and most describe hospital or clinical work. Across those 9 company-wide reviews, seven call the software easy to use or to move through and four say new staff learn it quickly, while two find it hard for new users at first, one of them calling it clunky. The same Clinisys-wide reviews raise three other complaints, each in two of the 9: the software is slow, an order is hard to correct or cancel once entered, and getting from one function to another takes too many clicks or detours.

Compliance in practice

Clinisys’s package pages list the standards CLS is presented as supporting, and describe traceability in more detail: chain of custody and an audit trail across the specimen lifecycle on the Toxicology page, document control, SOPs, non-conformances and staff competency records on the Clinical Pathology page. For a public health or environmental laboratory, that traceability is the relevant evidence. For GMP quality control, no electronic signature workflow, validation package or GAMP 5 documentation is published, and Clinisys lists its pharma offering as coming soon; that documentation is worth requesting during selection.

Clinisys LIMS capabilities

CapabilityEvidenceWhat the source describes
LIS Vendor-documented The Clinical Pathology page describes patient and result validation rules with embedded LOINC, ICD and SNOMED terminologies, on the same platform as the LIMS; sold in North America only. [26]
Sample management Vendor-documented The Food & Beverage page describes tracking retained samples from receipt through retention and disposal, with records of storage and movement. [23]
Billing Vendor-stated The CLS v2025.2 release lists venipuncture charge tracking as a billing feature. [56]
Biobanking Vendor-stated The Contract Services page says CLS supports biorepository activities within core laboratory workflows and connects specimen records for long-lived specimens. [24]
Client portal Vendor-stated The Environmental page describes a web portal where customers submit requests and access real-time results. [20]
Instrument integration Vendor-stated The Public Health page states bi-directional integration to instruments to improve the efficiency and accuracy of laboratory operations. [21]
Inventory Vendor-stated The Environmental Laboratory page lists inventory management among the package features, alongside sample login, collection scheduling and process control. [20]
QMS Vendor-stated The Clinical Pathology page mentions centralized documentation and SOPs and real-time monitoring of non-conformances and staff competencies. [26]
Reporting Vendor-stated The CLS page describes the Analytics Module, integrated with CLS, which combines predefined dashboards, reports and AI-assisted analytics on operational performance. [19]
All 23 other features
FeatureEvidenceWhat the source describes
Environmental and Water Quality content package Vendor-documented The Environmental and Water Quality pages each present a pre-configured Environmental & Water Quality Content Package for CLS. [20]
Retained sample management Vendor-documented The Food & Beverage page has a section on retained samples: tracking from receipt through retention and disposal, with storage and movement records. [23]
NGS pool-to-pool and plate transfers Vendor-documented The Genomics page describes NGS workflows with pool-to-pool testing and transfers from one or more source plates into a destination plate. [37]
CLS CARE AI assistant Vendor-documented Embedded assistant answering plain-language questions from validated CLS documentation, with API guidance and code examples; Clinisys states it has no access to patient data or live systems. [42]
Mobile field sample collection Vendor-stated The Environmental page describes remote sample collection on mobile devices in the field, integrated and automated with the laboratory workflow. [20]
Collection scheduling and sample login Vendor-stated The Environmental package provides sample login, collection scheduling, process control and inventory management. [20]
Level 4 client reports Vendor-stated The Environmental page says clients can build ad hoc queries and run preconfigured reports, including Level 4 reports. [20]
Drinking water program requirements Vendor-stated The Water Quality page says CLS helps laboratories meet NELAC/ELAP, Safe Drinking Water Act and UCMR Approval Program requirements. [36]
Surveillance and outbreak response Vendor-stated The Public Health page positions CLS for disease surveillance, emergency response and preparation for outbreaks, with NEDSS and LRN interfaces. [21]
Chain of custody and specimen audit trail Vendor-stated The Toxicology page describes chain of custody tracking from collection to reporting and a data audit trail covering the complete specimen lifecycle. [22]
Forensic toxicology and drug testing Vendor-stated The Toxicology page addresses laboratories undertaking forensic toxicology services and drug testing for healthcare providers, employers and government agencies. [22]
Client self-service reporting Vendor-stated The Toxicology page says clients access the information they need and run self-service reports through the web portal. [22]
Multi-level matrix management Vendor-stated CLS v2025.2 added multi-level matrix management for food safety testing. [56]
On-site and remote agricultural sampling Vendor-stated The Crop Sciences page cites integration with instruments and systems for on-site and remote collection, and tools to compare data, trace samples and test outliers. [25]
Client portal for contract labs Vendor-stated The April 2024 launch of the Contract Services offering cites an online portal giving clients real-time, self-service access to their data. [44]
QC rules and delta checks Vendor-stated CLS v2025.2 lists updated Westgard rules, delta checks and automated QC alerts among its key benefits for scientific laboratories. [43]
Clinical Pathology content package Vendor-stated The Clinical Pathology page presents a pre-configured content package of workflows populated into CLS, sold in North America in US English. [26]
Analytics Module Vendor-stated Module integrated with CLS giving dashboards, reports and AI-assisted analytics on operational performance; Clinisys states it does not diagnose, predict or recommend clinical actions. [19]
Gateway Module Vendor-stated Introduced in CLS v2025.3 as the successor to the LabOnline client portal, keeping its ordering, permissions and results access workflows. [58]
Clinisys Collect mobile app Vendor-stated Mobile application supported from CLS v2025.3 that applies CLS ordering logic, specimen identification and audit controls at the point of care. [58]
Decisions low-code engine Vendor-stated Partnership announced in July 2026 to embed Decisions, a low-code and no-code platform for workflow automation, rules management and integration, in the Clinisys Platform. [59]
Test configuration Vendor-stated CLS v2025.3 introduces a revised, scalable approach to test configuration. [58]
Document intelligence Vendor-stated Announced on 7 October 2026 as integrated document intelligence capabilities added to CLS. [46]

Limits stated in the vendor's own documentation

What independent sources say about Clinisys LIMS

Independent coverage: Moderate. Six public bodies document choosing or running Clinisys LIMS products, in state contracts and tenders, a selection poster, a council record and an EPA quality manual. User reviews cover Element and HORIZON LIMS on SelectScience and Clinisys as a whole on G2 (22 reviews), not necessarily this LIMS. No public record or independent article covers CLS by name yet. What this means

Limitations reported

Documented deployments

Other findings from independent sources (13)

User reviews

Alternatives to Clinisys LIMS

AlternativeDeploymentPricingWhy consider it
STARLIMS logoSTARLIMS On-premise, Cloud Quote only The other vendor New Jersey's public health and environmental laboratory compared with Clinisys in its 2025 LIMS selection.
QBench logoQBench Cloud From 16,500 USD per year, Foundation plan with 5 users included (starting price) A cloud-only LIMS also aimed at environmental and contract testing labs.

Clinisys LIMS product and company details

VendorClinisys, Inc. (Roper Technologies), Tucson, Arizona, USA
DeploymentCloud
HostingClinisys-hosted SaaS, built on Microsoft Azure according to a 2024 Clinisys interview
Latest versionCLS v2025.3, 2026-07-22
ModulesSample management, Instrument integration, Inventory, Reporting, Client portal, LIS, QMS
Websiteclinisys.com
Integrations (4)
Support and services (13)
Release history (6)
Company timeline and vendor figures (19)

Figures stated by the vendor:

Related pages

Clinisys LIMS FAQ

Is Clinisys Laboratory Solution the replacement for HORIZON LIMS and Element LIMS?

Clinisys says the full capabilities of HORIZON LIMS are now part of Clinisys Laboratory Solution, and that Element LIMS capabilities now enhance it. It still handles Element LIMS sales and upgrades.

How long does a Clinisys LIMS implementation take?

Clinisys publishes no duration. It says its pre-configured content packages shorten installation and that customization lengthens it. The one documented timeline is Alaska's move of an existing Clinisys system to the cloud: 75 days instead of the planned 180, reached with Clinisys's transition team by limiting the go-live to what was essential.

Does Clinisys Laboratory Solution cover clinical testing?

Since version 2025.2, released in November 2025, the same platform carries Clinical Pathology and Genomics LIS packages. Clinisys sells them exclusively in North America, and the Clinical Pathology package only in US English.

Which laboratories use Clinisys LIMS products?

Public records show state public health laboratories in Michigan, Alaska, New Jersey and New Hampshire, EPA Region 4's laboratory in Athens, Georgia (Element), and the City of Fresno's wastewater laboratory (Element). These records refer to Clinisys or its earlier HORIZON and Element products rather than to Clinisys Laboratory Solution by name.

Sources

18 independent sources and 43 vendor or vendor-supplied sources. A profile is published only when at least three independent publishers back it; this one has 11. See the methodology. Numbers match the references in the page.

Show all 61 sources

Independent sources

  1. New Hampshire Governor and Executive Council agenda, 17 August 2022, item 28 (Horizon Lab Systems amendment), New Hampshire Department of State (Governor and Executive Council) (accessed 2026-10-07)
  2. State of Michigan, Notice of Contract 260000000120, MDHHS Public Health LIMS (Clinisys, Inc.), State of Michigan, DTMB Central Procurement Services (accessed 2026-10-07)
  3. MiDEAL contract search, MDHHS Public Health LIMS, State of Michigan, DTMB Central Procurement Services (accessed 2026-10-07)
  4. Racing Against the Clock to Migrate LIMS to the Cloud (Innovations in Informatics: Laboratory Success Stories), Association of Public Health Laboratories (APHL) (accessed 2026-10-07)
  5. Strategic Modernization of Public Health and Environmental Laboratory's LIMS: A Case Study of NJDOH-ECLS's Transition from ELEMENT to Clinisys (poster, 2025), New Jersey Department of Health, Public Health and Environmental Laboratories (accessed 2026-10-07)
  6. City of Fresno, legislation ID 23-958, LIMS for the Fresno-Clovis Regional Wastewater facility laboratory, City of Fresno (accessed 2026-10-07)
  7. New Hampshire Governor and Executive Council agenda, 15 May 2019, item 40 (Horizon Lab Systems amendment), New Hampshire Department of State (Governor and Executive Council) (accessed 2026-10-08)
  8. New Hampshire Governor and Executive Council agenda, 15 July 2020, item 31 (Horizon Lab Systems amendment), New Hampshire Department of State (Governor and Executive Council) (accessed 2026-10-08)
  9. State of Alaska, Notice of Intent to Award, RFP 2024-1600-0053 / C1623-609, Cloud Based Laboratory Information Management System, State of Alaska, Department of Health (accessed 2026-10-08)
  10. EPA Region 4 Laboratory Operations and Quality Assurance Manual (LSBPMANL-120-R7), U.S. Environmental Protection Agency, Region 4 (accessed 2026-10-08)
  11. Gwinnett County, RP022-26 award tabulation, Laboratory Information Management System (Department of Water Resources), Gwinnett County, Georgia (accessed 2026-10-08)
  12. City of Abilene, RFP CB-2558 Laboratory Information Management System, Addendum #1 (questions and answers), City of Abilene, Texas (accessed 2026-10-08)
  13. Element LIMS, product page and reviews, SelectScience (accessed 2026-10-07)
  14. ChemWare, Inc. company page (HORIZON LIMS), SelectScience (accessed 2026-10-07)
  15. Clinisys company page (Clinisys Laboratory Solutions), SelectScience (accessed 2026-10-07)
  16. Clinisys Group products on TrustRadius, TrustRadius (accessed 2026-10-07)
  17. Element LIMS reviews on TrustRadius, TrustRadius (accessed 2026-10-07)
  18. Clinisys reviews on G2, G2 (recorded manually 2026-10-13)

Vendor and vendor-supplied sources

  1. Clinisys Laboratory Solution, product overview, Clinisys (accessed 2026-10-07)
  2. Clinisys Environmental Laboratory, Clinisys (accessed 2026-10-07)
  3. Clinisys Public Health Laboratory, Clinisys (accessed 2026-10-07)
  4. Clinisys Toxicology Laboratory, Clinisys (accessed 2026-10-07)
  5. Clinisys Food & Beverage Laboratory, Clinisys (accessed 2026-10-07)
  6. Clinisys Contract Services Laboratory, Clinisys (accessed 2026-10-07)
  7. Clinisys Crop Sciences Laboratory, Clinisys (accessed 2026-10-07)
  8. Clinisys Clinical Pathology Laboratory, Clinisys (accessed 2026-10-07)
  9. HORIZON is now Clinisys, Clinisys (accessed 2026-10-07)
  10. Promium is now Clinisys, Clinisys (accessed 2026-10-07)
  11. Clinisys, our history, Clinisys (accessed 2026-10-07)
  12. Cybersecurity and compliance, Clinisys (accessed 2026-10-07)
  13. Clinisys certifications, Clinisys (accessed 2026-10-07)
  14. Clinisys privacy policy, Clinisys (accessed 2026-10-07)
  15. Clinisys acquires Promium (press release, 3 May 2023), Clinisys (accessed 2026-10-07)
  16. Clinisys advances its unified laboratory platform with CLS v2025.3, Clinisys (accessed 2026-10-07)
  17. Clinisys partners with Decisions to bring low-code / no-code LIMS/LIS configuration, Clinisys (accessed 2026-10-07)
  18. Clinisys Water Quality Laboratory, Clinisys (accessed 2026-10-08)
  19. Clinisys Genomics Laboratory, Clinisys (accessed 2026-10-08)
  20. Clinisys, our customers, Clinisys (accessed 2026-10-08)
  21. Clinisys services and response times, Clinisys (accessed 2026-10-08)
  22. Clinisys support, Clinisys (accessed 2026-10-08)
  23. Clinisys client training, Clinisys (accessed 2026-10-08)
  24. Clinisys advances trusted AI in LIMS with CLS CARE, Clinisys (accessed 2026-10-08)
  25. Clinisys launches Clinisys Laboratory Solution (CLS) v2025.2, Clinisys (accessed 2026-10-08)
  26. Ever-growing market needs of Food Safety and Contract Services laboratories supported with new offerings launched under Clinisys Laboratory Solution, Clinisys (accessed 2026-10-08)
  27. The Power of HORIZON LIMS backed by the Clinisys Group, Clinisys (accessed 2026-10-08)
  28. Clinisys news (US), listing page, Clinisys (accessed 2026-10-08)
  29. Roper Technologies, Form 10-K for fiscal year 2025, Roper Technologies (SEC EDGAR) (accessed 2026-10-07)
  30. Roper Technologies, Form 10-Q for the quarter ended 30 September 2025, Roper Technologies (SEC EDGAR) (accessed 2026-10-07)
  31. Roper Technologies, 10-Q Q1 2022, note on business acquisitions, Roper Technologies (SEC EDGAR) (accessed 2026-10-07)
  32. Roper Technologies, 10-Q Q2 2022, note on business acquisitions, Roper Technologies (SEC EDGAR) (accessed 2026-10-07)
  33. Roper Technologies, 10-Q Q2 2023, note on business acquisitions, Roper Technologies (SEC EDGAR) (accessed 2026-10-07)
  34. Montagu Private Equity announces the sale of CliniSys to Roper Technologies, Montagu Private Equity (accessed 2026-10-07)
  35. Clinisys completes acquisition of Sunquest, Horizon and Apollo, Digital Health, vendor-supplied content (accessed 2026-10-07)
  36. New Clinisys Laboratory Solutions provide 4 LIMS offerings, Clinical Lab Products (CLP), vendor-supplied content (accessed 2026-10-07)
  37. Shaping the labs of the future (Ask the Expert, brought to you by Clinisys), Lab Manager, vendor-supplied content (accessed 2026-10-07)
  38. Clinisys launches Clinisys Laboratory Solution (CLS) v2025.2, Business Wire, vendor-supplied content (accessed 2026-10-07)
  39. 50% quicker LIMS implementation for environmental & water quality labs, Labinsights, vendor-supplied content (accessed 2026-10-07)
  40. Clinisys advances its unified laboratory platform with Clinisys Laboratory Solution (CLS) v2025.3, Business Wire, vendor-supplied content (accessed 2026-10-08)
  41. Clinisys partners with Decisions to bring low-code / no-code LIMS/LIS configuration to laboratory environments, Business Wire, vendor-supplied content (accessed 2026-10-08)
  42. Clinisys releases Laboratory Solution update with AI-powered support agent, Clinical Lab Products (CLP), vendor-supplied content (accessed 2026-10-08)
  43. Promium awarded national LIMS contract from Environment Canada, Technology Networks, vendor-supplied content (accessed 2026-10-08)